Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015938862.1_cds_XP_016483591.1_74689
CDS Infomation

[gene=LOC107804253] [db_xref=GeneID:107804253] [protein=protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3-like isoform X3] [protein_id=XP_016483591.1] [location=complement(join(388..501,1205..1605,1792..1877,1979..2236,3695..3876,4223..4333,5925..5996,6159..6271,6600..6648,7801..7935,13979..14043,17139..17197,19860..20209))] [gbkey=CDS]
Sequence

ATGGACCTTCTCCTTCCCATTTCAGTGCGACTCTCTGCATTTTCACGCGGTTCACTGTGC
GCTCTTTCTCCGACAAATCCCTTCAATTCTTGCTCTTTTCCACACCAGAGAATTAGAATC
AAGTTGAAATGCAGCCCCGAGCCTACGCGAGCGGAAACGAACTCGATTTTCGACAGCAGA
GACAGTAACAATTATGAAGGGAATCGTGAAAATGATATGCAGGGAGAAGGGTTAAAAAAT
GTGTGGGAAGAGACTGAGTTTGTGGAGGTATTTGGGATTGGCAGCAGGAAAGACGCTCTG
CTTGACTTCTGCTTGGCTTCACCTTCTATTTCCCCCGCTTTAAGATTTTGGAATATTCTC
ATGAAAGACTCAGAAAAGGTGCTATTACAAGAGAAATTGCCTACAGAAGATGTTTCTTCA
AGAATTGTGGAAGTTCCATCAGCGATAAATTCATGTCCCAAAGCAGTTATACTTGTGGCT
AGTGCGGCTTATGGCACTGATCATGTCCCAGCACTTGATATTATAAGAAGATTAAAGTCC
AGAAATGGACTAGTTATTGGCATCATTTTGAAGCCTTTCAGCTTTGAAGGACGAAGGCGC
TATGATGAGGTCACGGATTTGATTGACAAACTTCAAAGGCATGCAACTGTCTGTATAGTT
ATTGACACTGATGGTCTCCTCAAGAAAGATCTATTAACTCTGGATGAGGCTTTGAAGACT
TCATATAATGCTGTGCTGATGGCTGTTAATGCCATTCCAATTCTCATGTCTGACGACCAC
ATAAAGCTTCTAGATGTGATAGATGGCGGTACTAAGGAACTGAGTGGTCCAGAGCTAATA
AAAATTCTTGAAAGTTACAAAGAGGCCAAGACTGGATTTGGATCTGGCTACAATATTGAA
ACTTCAATTCTGCGAGCTGTGTATGACTGCCCCTTCCTTGGTCTGGGAGTAAAGGGCTCA
AATGGTGTGATTATATGCATTATTGCAAGTTCAGGTGCTGTAAACTCCAGCAATGTGCAT
AGCATCTTGCACACGTTTCGTCAAACTACCGGATGCAATGGAGACATTGTGATTTCCATT
GTCCAGGAACCCAATATGGAGGCAAATTTAATAGTAACTACTTTAGTTACGTGTGGGTAC
GCTGAACAGGAATCTTCCCAAAAAAGTAACTTATTCTCTAGACTGGCACAACATCTTCCT
TTCATTTTTAATATCCTTAAGAAGCCAGATCCACCACTTCAAACTGCTAAAGAAAGCAAA
ATCGATGAGAGTCCAGTAATTTCTGATATGGCAGAATTTATTTCTGTGGATAATGCGCGT
AAGGATGAGTCAGTCTATGCTGGGGAACTGCAGACATTATTTCGCACTGATAGTGAAGGA
GCATCTTCTTTGAGAGATTATGATAATGTTTCTGATGAAAGGAAGATTGAACTGTCAAAC
TTTGACCCTTATTCATCCACGGATGATGTTGGTACTGAAGAACCTCTTGTTTTTAAAAGA
GAGCTGCTCACCAGATGGAATCTGAGGCCAGGAAATGACACTTCAGTAGGATTGGCTACA
GAAGGGACCGAGAATATAGAAGCCAATGACATGGTTGACAATACCAGCACCTACAAACTT
CCGGTTGGTGTAAAGCAGAAAGAACAGTTGCAAACTAGTCCAGGTTCCTCAAACTCAAGA
ACTTATACGGGGAGGAAATCTGAAGAAAGCAAAATCGCTCAGTCTAGAGATATTTCAAGT
CTATCTCAGGATGCAGTGGATGAAGAATACAGCGAAATTATGGCAGATGTTTACAACTCT
AACCCTTCCTTGACTGAAAGAAACTATGCCAGTGTTCCAAAAAAGAAAGGAGTTCTCTCT
TCTCGGGCGGCCTCTATGCTGGAAGCCGAGCGAGATTCAAAAAAGAAGTGGATTCCTATA
GTTGAAATGAAATACAGGGGAGGTATATACAGAGGTCGGATTGAAGGAGGACTTCCCGAA
GGAAAGGTACTTTGA

Peptide Sequence

PEP ID

XP_016483591.1
PEP Infomation

PREDICTED: protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3-like isoform X3 [Nicotiana tabacum]
Sequence

MDLLLPISVRLSAFSRGSLCALSPTNPFNSCSFPHQRIRIKLKCSPEPTRAETNSIFDSR
DSNNYEGNRENDMQGEGLKNVWEETEFVEVFGIGSRKDALLDFCLASPSISPALRFWNIL
MKDSEKVLLQEKLPTEDVSSRIVEVPSAINSCPKAVILVASAAYGTDHVPALDIIRRLKS
RNGLVIGIILKPFSFEGRRRYDEVTDLIDKLQRHATVCIVIDTDGLLKKDLLTLDEALKT
SYNAVLMAVNAIPILMSDDHIKLLDVIDGGTKELSGPELIKILESYKEAKTGFGSGYNIE
TSILRAVYDCPFLGLGVKGSNGVIICIIASSGAVNSSNVHSILHTFRQTTGCNGDIVISI
VQEPNMEANLIVTTLVTCGYAEQESSQKSNLFSRLAQHLPFIFNILKKPDPPLQTAKESK
IDESPVISDMAEFISVDNARKDESVYAGELQTLFRTDSEGASSLRDYDNVSDERKIELSN
FDPYSSTDDVGTEEPLVFKRELLTRWNLRPGNDTSVGLATEGTENIEANDMVDNTSTYKL
PVGVKQKEQLQTSPGSSNSRTYTGRKSEESKIAQSRDISSLSQDAVDEEYSEIMADVYNS
NPSLTERNYASVPKKKGVLSSRAASMLEAERDSKKKWIPIVEMKYRGGIYRGRIEGGLPE
GKVL

Transcript Sequence

Gene sequence data has not been registered.